.. toctree::
   :maxdepth: 3
   :caption: Home

   index.rst

.. toctree::
   :maxdepth: 3
   :caption: Installation

   installation/installation

.. toctree::
   :maxdepth: 3
   :caption: How-to

   tutorial/0_create_qupath_dataset.md
   tutorial/1_import_qupath_project.md
   tutorial/2_registration.md
   tutorial/3_export_registrations.md
   tutorial/4_qupath_analysis.md

.. toctree::
   :caption: See also

   Whole-brain analysis with BraiAn <https://silvalab.codeberg.page/BraiAn/>

.. toctree::
   :maxdepth: 3
   :caption: Tutorial

   tutorial/demo_dataset.md
   tutorial/video_tuto.md
   tutorial/slides_tuto.md

.. toctree::
   :maxdepth: 3
   :caption: Advanced

   explanation/file_formats_supported.md
   explanation/registration_storage.md

.. toctree::
   :maxdepth: 3
   :caption: FAQ

   frequently_asked_questions.md